PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070171.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 342aa MW: 39269 Da PI: 9.2848

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	104.4	9.8e-33	25	116	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk+++++ed++++ +isw+++++sfvv+ +++f++++LpkyFkh+nf+SF+RQLn+YgFkk++++ weF+++ F+ gkk+ll++ XP_028070171.1 25 FLKKTFHMVEDPDTDIIISWTASQKSFVVWGHRQFSTNLLPKYFKHNNFSSFIRQLNTYGFKKIDSDI---------WEFANEAFQGGKKHLLKN 110 9******************999************************************9876.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 kr+k+ XP_028070171.1 111 KKRRKH 116 *987 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MPCSPPISSA PKPMVGLHET GPSPFLKKTF HMVEDPDTDI IISWTASQKS FVVWGHRQFS 60 TNLLPKYFKH NNFSSFIRQL NTYGFKKIDS DIWEFANEAF QGGKKHLLKN KKRRKHNPQN 120 VQQQGVMRPF LNSANFGIET ELEKLRNDRM KMKMEIMKLK QQQENTESYL AAVKERIGNT 180 VYKQQHILIF MAKAFSIPAL LHQFIHLMRL KKELCNGQIA NKRRLAATPQ SNEDQVTNKN 240 QEQVERLFSA SLDVESSPSQ DQKINAAPGP MSPNLSSENC ILWEKLLEDE LIYENGSAQV 300 EAELVQHQSK IVLQLENLIA KPPDWAFYVK DLGEQVSCLE SK

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MPCSPPISSA PKPMVGLHET GPSPFLKKTF HMVEDPDTDI IISWTASQKS FVVWGHRQFS  60
TNLLPKYFKH NNFSSFIRQL NTYGFKKIDS DIWEFANEAF QGGKKHLLKN KKRRKHNPQN  120
VQQQGVMRPF LNSANFGIET ELEKLRNDRM KMKMEIMKLK QQQENTESYL AAVKERIGNT  180
VYKQQHILIF MAKAFSIPAL LHQFIHLMRL KKELCNGQIA NKRRLAATPQ SNEDQVTNKN  240
QEQVERLFSA SLDVESSPSQ DQKINAAPGP MSPNLSSENC ILWEKLLEDE LIYENGSAQV  300
EAELVQHQSK IVLQLENLIA KPPDWAFYVK DLGEQVSCLE SK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	114	LKNKKRR
2	111	115	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	6e-72	HSF family protein