PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028070169.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HSF | ||||||||
Protein Properties | Length: 182aa MW: 20190.7 Da PI: 4.0519 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 75.8 | 7.8e-24 | 100 | 158 | 2 | 60 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Flkk+++++ed++++ +isw+++++sfvv+d+++f++++LpkyFkh+nf+SF+RQL +Y XP_028070169.1 100 FLKKTFHMVEDPDTDIIISWTASQKSFVVWDHRQFSTNLLPKYFKHNNFSSFIRQLYTY 158 9********************999*********************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
METLKIKQEN IVVIDDDIPG GGGGGLFEEE EEEEEEETVK VVELNEEAVV LVDDDWVSGE 60 GVVLVGGGGG GGGDSMPCSP PISSAPKPMV GLHETGPSPF LKKTFHMVED PDTDIIISWT 120 ASQKSFVVWD HRQFSTNLLP KYFKHNNFSS FIRQLYTYVL DLKVDDLQML PRLEQMEMDR 180 CG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 6e-33 | HSF family protein |