PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028070027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | TCP | ||||||||
Protein Properties | Length: 137aa MW: 14858.2 Da PI: 10.9623 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 110.2 | 2.9e-34 | 10 | 113 | 3 | 110 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..kaaksa 94 k++ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ + WLl+ +pai e+tgt++ +a ++ ++s +++ +++ XP_028070027.1 10 IKRSATKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGEIVKWLLERVEPAIFEATGTGTVPAIAVsVNGSL-------KIPttPPTTTE 97 58999**********************************************************88888444211111.......12221111112 PP TCP 95 akskksqksaasalnl 110 a+ k++++ a+++++ XP_028070027.1 98 AQAAKKKRKRACTSEF 113 2333333333333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MIEKSKVGKI KRSATKDRHT KVEGRGRRIR MPAACAARIF QLTRELGHKS DGEIVKWLLE 60 RVEPAIFEAT GTGTVPAIAV SVNGSLKIPT TPPTTTEAQA AKKKRKRACT SEFIDMSDSA 120 PTPAPSNFAP VTTMTPQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51910.2 | 2e-49 | TCP family protein |