PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069821.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 350aa    MW: 39328.4 Da    PI: 4.6742
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069821.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.4e-20104154155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdps+   r r +lg++ taeeAa+ +++a+ +l+g
  XP_028069821.1 104 KKFRGVRQRP-WGKWAAEIRDPSK---RVRLWLGTYETAEEAARVYDHAAIQLRG 154
                     59********.**********975...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MDRSIVKYSE HRRQTTTVRR KLPEMNAAGP RVVRISVTDA EATDSSSDEE GLFRRQRVKR  60
FFNEIIIESS SRENLNVNNR PATKTNRRKK STGKIQTPAN RSEKKFRGVR QRPWGKWAAE  120
IRDPSKRVRL WLGTYETAEE AARVYDHAAI QLRGPDALTN FVTPPAKIAR EITPVSVSDY  180
NSGDDKNNLP SPTSVLRFHS PTNEEAELSL SDSVIAHSPA NEEAELSLSD SVITKSQHFT  240
CDDVSGSENF HDISALDSML PDSLFDFQDP VPELFEWSGL RDNEFGFGID TVLPDSLCNF  300
QDPERLFGSG DDFGFGLDQS PMDDYFQIDD YIQFQDIGGD ILGSDSPVAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.16e-56ERF family protein