PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069708.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 421aa    MW: 45695 Da    PI: 9.8608
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.98.8e-06185207223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                      C+ Cg++F++ ++L+ H+ + H
  XP_028069708.1 185 ACSECGEVFPTMESLEIHQAVrH 207
                     6******************9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    
MNKRASTAAI LSCFLALLFM ALLTFVPNSS KPKKQTSKPK RKHHKNRPSS WDQIKNLLSC  60
KQMEQSKVHD PSKTSAGYAK LGSCSSICSF RDVVHGNTSR VVHRADNSPE SSSLGQETRL  120
LSRKAVNGST SNRSLSSSAR SNASGVTHTS SSSKGMQLRK LSGCYECRTI VDPSRYTSPR  180
ATLCACSECG EVFPTMESLE IHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDNPVCKI  240
ERILKVHNTR RTIQRFEDCR DAVKIRVNAN TKKNPRCAAD GNELLRFHST TLSCTLGARG  300
SSSLCGLTPG CGVCTVIKHG FSGKASDGKG VRTTASSGRA HDCINGGDGR RAMLVCRVIA  360
GRVRRMADDG AEEEESVSAG SYDSVAGYAG IYSNLEELYV FNPRAILPCF VVIYKALQCS  420
G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-158C2H2 family protein