PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069660.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LBD
Protein Properties Length: 185aa    MW: 20129.5 Da    PI: 8.4808
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260141.52.7e-4411109199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll+++++++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l++el+
  XP_028069660.1  11 PCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEIQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVVRLQKELD 105
                     7*********************************************************************************************9 PP

          DUF260  96 llke 99 
                     ++++
  XP_028069660.1 106 ATNA 109
                     9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MASSSSYSNS PCAACKFLRR KCLPGCIFAP YFPPEEPQKF ANVHKIFGAS NVSKLLNEIQ  60
PHQREDAVNS LAYEAEARIK DPVYGCVGAI SVLQRQVVRL QKELDATNAD LMRFTGGNTA  120
FPVFPGSDVA SQMGTGQRPV PYGRRMGSHG HGASFDHNSG LSFPYNSPWN NNRSGDSPER  180
GDGSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.21e-67LBD family protein