PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069495.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 712aa    MW: 80584.5 Da    PI: 6.7649
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069495.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3634.3e-1113377081374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++c +av+  d + +++ L+r+++++  +gd ++Rla+yf++AL+arla++++ ly   ++++    + +++l+++++++ ++P+ k+s+
  XP_028069495.1 337 LRTLLTQCSQAVARADIRSVNEQLNRIRQHSFAQGDGVERLAHYFANALEARLAGTGTALYVVSSTKR---ISAADVLKSYQTYVRACPFNKVSN 428
                     6789***************************************************8888885444444...459********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                       aN+ I++ +++++++H+iDf+i +G+QWp+L++ L++R++gpp+lRiTg++ p++g   +e++e+tg+rL+ ++++++v+fe+++ +ak++++
  XP_028069495.1 429 SYANRSIMKLAQTATTLHVIDFGILYGFQWPCLIHHLSARSGGPPKLRITGIDFPQPGfrPAERVEQTGRRLETYCKRFNVQFEYTA-IAKKWDT 522
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +el+eL+++++E+l+Vn+ ++l +++de+v  +s+rd vL+lv++++P+++++   +  +n++ F++rf eal ++s++fd++ea++pre+ +r 
  XP_028069495.1 523 IELDELKFNRDEVLVVNCLFRLRNVPDETVLANSPRDIVLNLVQRIKPDMFIHGVVNGMYNAPFFVTRFREALFHFSSIFDMFEATIPREDGDRL 617
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++E+e+ gr+i+nv+aceg+er+er et+++W+ r  +aGFk++pl+++ +k + ++++ ++ + + v+e+ +++++gWk+r + ++S+W+
  XP_028069495.1 618 MLEKEIYGRDIMNVIACEGTERVERPETYKQWQIRTLRAGFKQLPLNQDLVKLVTSMVKVHYHKDFVVDEDGNWMLQGWKGRIIHALSCWK 708
                     **************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    
MESLVQGFSA SVFDQKNLVN LNHTYMDFPF LSRASKPIYK SDSSTSSDVN WVSDASSEEG  60
AFSDATLKLI NQMLMEEDDL EDKPCMFREC LALQATEKSF YDVLGEKYPP PSSNAHHAFD  120
LNPSPDDHSP DSESSDSPGS VNYFVEPNWV RDQEKLERSS SHFGTTFEPI SQSISSSKGS  180
GDGSVDTLVN QSQPFWLLSG GSTKVAELVP NKKFVNYGLE MKEKNSKVAV QEEKNRRDHS  240
PNASREKKTH HRGNGDNADD GRTNKQLASY TDDSDEQLKM FDIVFLSSDL RQGSELCPHH  300
DDNDSAKKLQ QSGPSKGSNG GKGRGRKQGN KKEMVDLRTL LTQCSQAVAR ADIRSVNEQL  360
NRIRQHSFAQ GDGVERLAHY FANALEARLA GTGTALYVVS STKRISAADV LKSYQTYVRA  420
CPFNKVSNSY ANRSIMKLAQ TATTLHVIDF GILYGFQWPC LIHHLSARSG GPPKLRITGI  480
DFPQPGFRPA ERVEQTGRRL ETYCKRFNVQ FEYTAIAKKW DTIELDELKF NRDEVLVVNC  540
LFRLRNVPDE TVLANSPRDI VLNLVQRIKP DMFIHGVVNG MYNAPFFVTR FREALFHFSS  600
IFDMFEATIP REDGDRLMLE KEIYGRDIMN VIACEGTERV ERPETYKQWQ IRTLRAGFKQ  660
LPLNQDLVKL VTSMVKVHYH KDFVVDEDGN WMLQGWKGRI IHALSCWKPI ED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-178GRAS family protein