PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069491.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 705aa    MW: 79384.3 Da    PI: 6.5175
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS370.52.2e-1133307011374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++c +av+  d + +++ L+r+++++s +gd ++Rla yf++AL+arla++++ ly a ++++ s    +++l++++++ +++P+ ++s+
  XP_028069491.1 330 LRTLLTQCSQAVARADIRSVNEQLNRIRQHSSAQGDGVERLAYYFANALEARLAGTGTALYVASSTKRIS---AADVLKSYQTYIKACPFNRMSN 421
                     6789***************************************************999999666666665...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                       aN+ I++ +++++++H+iDf+i +G+QWp+L+++L++Rp+gpp+lRiTg++ p++g   +e++e+tg+rL+ ++++++v+fe+++ +ak++++
  XP_028069491.1 422 SYANRSIMKLAQTATTLHVIDFGILYGFQWPCLIHQLSARPSGPPKLRITGIDFPQPGfrPAERVEQTGRRLETYCKRFNVQFEYTA-IAKKWDA 515
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +el+eL+++++E+l+Vn+ ++l +++de+v  +s+rd vL+lv++++P+++++   +  +n++ F++rf eal ++s++fd++ea++p+e+ +r+
  XP_028069491.1 516 IELDELKIDSDEVLVVNCLFRLRNVPDETVLANSPRDIVLNLVQRIKPDMFIHGVVNGMYNAPFFVTRFREALFHFSSIFDMFEATIPHEDGDRV 610
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++E+e+ gr+i+nv+aceg+er+er et+++W+ r  +aGFk++pl+++ +k +++l++ ++ + + v+e+ +++++gWk+r ++++S+W+
  XP_028069491.1 611 MLEKEIYGRDIMNVIACEGTERVERPETYKQWQIRTLRAGFKQLPLNQDLVKVVRSLVKVHYHKDFVVDEDGNWMLQGWKGRIVYALSCWK 701
                     **************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 705 aa     Download sequence    
MEALVQAFSA SVFDQKNLVN LNHTYMDFPI LSQASKPIYK SDSSSSSDVN RVSDASSEEG  60
AFSDATLKLI NQMLMEEDDL EDKPCMFREC LALQATEKSF YDALGEKYQP PSSNADHVFD  120
LNPSPDDHSP DGESSDSPGS VNYFVEPNWV RDQEKLERSS SHFGTTCEPV SQSIGSSKGS  180
GDGSVDTLVN QSQPFWLLSG GNTKVAELVP NKKFVNYGLE MKEKNSKVAA QEEKNGSREK  240
KTHHRGNGDN ADDGRTNKQL ASYTDVSDEQ LKMFDIVFLS SDLRQGSELC PHHDDNDSAK  300
KLQQNGPSKG SNGGKGRGRK QGNKKEMVDL RTLLTQCSQA VARADIRSVN EQLNRIRQHS  360
SAQGDGVERL AYYFANALEA RLAGTGTALY VASSTKRISA ADVLKSYQTY IKACPFNRMS  420
NSYANRSIMK LAQTATTLHV IDFGILYGFQ WPCLIHQLSA RPSGPPKLRI TGIDFPQPGF  480
RPAERVEQTG RRLETYCKRF NVQFEYTAIA KKWDAIELDE LKIDSDEVLV VNCLFRLRNV  540
PDETVLANSP RDIVLNLVQR IKPDMFIHGV VNGMYNAPFF VTRFREALFH FSSIFDMFEA  600
TIPHEDGDRV MLEKEIYGRD IMNVIACEGT ERVERPETYK QWQIRTLRAG FKQLPLNQDL  660
VKVVRSLVKV HYHKDFVVDE DGNWMLQGWK GRIVYALSCW KPIKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-175GRAS family protein