PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028069414.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 356aa MW: 41349.1 Da PI: 6.5649

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028069414.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.4	4.5e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kkv++++++l +vikevd+yk+ePwdL++ k+ +ee+ +wyfFs++dkky+tg+r+nratk+g+Wkatg+dk++ XP_028069414.1 7 VPPGFRFHPTDEELVDYYLRKKVASRRIDL-DVIKEVDLYKIEPWDLQElcKIGTEEQsDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 100 69**************************.9***********954555554445******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++lvg++ktLvfykgrap+g+k+dW+mheyrle XP_028069414.1 101 YA-KHSLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MNTFSHVPPG FRFHPTDEEL VDYYLRKKVA SRRIDLDVIK EVDLYKIEPW DLQELCKIGT 60 EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YAKHSLVGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEI GTSQEEGWVV CRVFKKRMAT TRKMGEHESP CWYDDQVSFM 180 PDFESPRQIS QSYTSYHHHY SFKQEHELQY NNMPHDPFLQ LPHLESPKIS QPTVTESCNS 240 VVPYGLNRNN GSSLQLSTPA QEEPLQQSNQ QNMNLFYSNN EQAAVDQLTD WRVLDKFVAS 300 QLSHEDSSKD HNYSNKASFQ VGGVEHMNML VNDSKSQDVV SDFASVSTST CPIDLW

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MNTFSHVPPG FRFHPTDEEL VDYYLRKKVA SRRIDLDVIK EVDLYKIEPW DLQELCKIGT  60
EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YAKHSLVGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEI GTSQEEGWVV CRVFKKRMAT TRKMGEHESP CWYDDQVSFM  180
PDFESPRQIS QSYTSYHHHY SFKQEHELQY NNMPHDPFLQ LPHLESPKIS QPTVTESCNS  240
VVPYGLNRNN GSSLQLSTPA QEEPLQQSNQ QNMNLFYSNN EQAAVDQLTD WRVLDKFVAS  300
QLSHEDSSKD HNYSNKASFQ VGGVEHMNML VNDSKSQDVV SDFASVSTST CPIDLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-150	NAC family protein