PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069278.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 283aa    MW: 31758.4 Da    PI: 5.1502
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.7e-2173122356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f t+eeAa+a+++a++k++g+
  XP_028069278.1  73 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTPEEAARAYDKAARKIRGN 122
                     9*******.**********954...4*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MCGGAILKGL FPRDGHRSVS ALDLWPNSPF ATKFNTFPSD LNSISPQVPQ PISKRPGEEQ  60
LEKPVKRQRK NLYRGIRQRP WGKWAAEIRD PRKGVRVWLG TFNTPEEAAR AYDKAARKIR  120
GNKAKVNFPN EGDNYIPPTT KRNPYPPLHQ THNGFADDLN QFGTCNCNGF YGEEFYGSGS  180
ESAYESVGSG EVKVKEEEET KEVREKSKEP SLIEVAEEEE EQNQVQKLSE ELMVFESYMK  240
FYQIPYLDGQ SAAALPIPAH ESVAGGDAAV ELWSFDDVAL DVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.11e-38ERF family protein