PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 29316.6 Da PI: 9.2717 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 9.6e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd ll+++++q+G g W+ I+++ g++R++k+c++rw++yl XP_028068990.1 13 KGAWTGEEDSLLKKCIEQYGEGMWHQIPSRAGLNRCRKSCRLRWLNYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.3 | 4.7e-15 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T +E +l++++ k+lG++ W++Ia +++ gRt++++k++w++ XP_028068990.1 66 RGNFTMDEVDLIIKLQKLLGNR-WSLIAGRLP-GRTANDVKNYWNTN 110 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDSVCCVPLG VRKGAWTGEE DSLLKKCIEQ YGEGMWHQIP SRAGLNRCRK SCRLRWLNYL 60 RPNIKRGNFT MDEVDLIIKL QKLLGNRWSL IAGRLPGRTA NDVKNYWNTN LQKKLITQRE 120 KVKAKTQEKM ETIIIRPRPR IISKNQPRLM DKTAIIENIR TRDNLSEPFP LPLPLPPSRD 180 DGISWDNIVV NSKINNGITW SANGLIEEGN IGNWYEKIRP GTHTSCGNFI DEDQSDWSDI 240 FFNNVNLWDL LGDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 1e-57 | MYB family protein |