PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068986.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 221aa MW: 25665.2 Da PI: 9.2992 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86 | 2.2e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA+EL +LCdaev +iifsstgklye+ s XP_028068986.1 10 RIDNTTSRQVTFSKRRSGLLKKAKELAILCDAEVGLIIFSSTGKLYEFTS 59 8***********************************************75 PP | |||||||
2 | K-box | 74 | 4.3e-25 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ ++ + +q+e+a L+++++nLq+++R+l+Ge+L Ls+k+Lq+Le+qLe sl+ +R kK +l++++ el kk + +++en+++ kk+ XP_028068986.1 81 NQVSDVKFWQREAAILRQQLHNLQENHRQLMGEELYGLSVKDLQNLENQLEMSLQGVRMKKGNLIHQENVELYKKVNLIHQENMEMYKKV 170 677889******************************************************************************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MGRGKIVIRR IDNTTSRQVT FSKRRSGLLK KAKELAILCD AEVGLIIFSS TGKLYEFTST 60 SMKSVIERYN KSREENHQLH NQVSDVKFWQ REAAILRQQL HNLQENHRQL MGEELYGLSV 120 KDLQNLENQL EMSLQGVRMK KGNLIHQENV ELYKKVNLIH QENMEMYKKV YGTRDVIAVT 180 ENTQNPYGFS IGDDSCVPIH LQLSQPEHQI HEIPTSETRS R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 6e-98 | MIKC_MADS family protein |