PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 214aa MW: 22960.7 Da PI: 9.5403 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.5 | 6.1e-12 | 40 | 80 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +g ++r++lg+f++ae+Aa+a++aa+++l+g+ XP_028068923.1 40 RVRGVRKRP-WGX-------------KARVWLGTFDSAEDAARAYDAAARSLRGA 80 589***999.888.............5*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MRRVRATAAA KAAPTTAAKP AMTAGVPNGS GSRSPAKEIR VRGVRKRPWG XKARVWLGTF 60 DSAEDAARAY DAAARSLRGA KAKTNFPIAS LSLAPMIPYQ EINNPLIDQR LYPPHHQIIP 120 QRPTSSSLSS TVESSCGPKP PQTAVLPPSS SRRYPRTPPI LPDDCRSDCD SSSSVVDDGD 180 GDIASSSIRK VMDFDLNVLP PLDEAGEDDL DLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 7e-17 | ERF family protein |