PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028068862.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 334aa MW: 36935.1 Da PI: 6.8354

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028068862.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.0005	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_028068862.1 137 YQCKTCNRTFPSFQALGGHRASH 159 9***********99999998887 PP
2	zf-C2H2	12.4	0.00047	218	240	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg F++ L H+r+H XP_028068862.1 218 HECSVCGAEFTSGQALGGHMRRH 240 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MEVSEELNGG PKDPTTHIVK GKRTKRQRPQ SPIPFSIATH SSSGDGGGDN TNYVATATAT 60 ATSVEFIESA TEEEEDMANC LILLAQGRSR DPSSKPIDQD HDHDHEHDQE NMGFKFTSKR 120 FIEAPSTGNG KVGMYVYQCK TCNRTFPSFQ ALGGHRASHK KPKPPSTAEE KKPITATATM 180 AALYSDEEEE QFKSSSLSLQ LSNNRSFYGN PKPLPKVHEC SVCGAEFTSG QALGGHMRRH 240 RAPVGANTIL SLSPLRCEPD DHEMKKPKIM LSLDLDLNLP APDDESKFAF AFTSKKQQQQ 300 QQQQQQQQPQ KQQQQQQQQP LVLSATPALV DCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	2e-53	C2H2 family protein