PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068622.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 352aa MW: 40480.7 Da PI: 8.16 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94 | 7e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_028068622.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 83.3 | 5.4e-28 | 78 | 171 | 5 | 98 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++s e+++++l++e+a + ++ie L+ +R+llGedL+s++++eLqq+eqqLe+s++++R+kK+e ++eqi++l++kek l en +L +k+ XP_028068622.1 78 TDNSSVEENMQHLKHEAADMANQIELLEVAKRKLLGEDLGSCTMEELQQIEQQLERSVSRVRAKKMEAFMEQIDQLKEKEKVLTAENAKLCEKI 171 455578899*********************************************************************************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 STQETIQRYQ RHTKAVQTDN SSVEENMQHL KHEAADMANQ IELLEVAKRK LLGEDLGSCT 120 MEELQQIEQQ LERSVSRVRA KKMEAFMEQI DQLKEKEKVL TAENAKLCEK ISSCAFISRG 180 NNSQWNTSHF FPTWCIYPWI SCPASDCSLS PCILRPILFH NFMEVEYIPV VSPLENQKEN 240 AIHFAKRTGH VIVTALNVVQ TGHVYGDFML FAKAAESKQE NPTLYMIEMK KVESTFHLSS 300 LEAMDFLDTF LSMNPDSSGH VKIHDFSRVL RLKACGLLKR SVTLLFFYFY FF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 7e-75 | MIKC_MADS family protein |