PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068621.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 366aa MW: 41892.4 Da PI: 8.6799 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.9 | 7.4e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_028068621.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 84 | 3.2e-28 | 98 | 191 | 5 | 98 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++s e+++++l++e+a + ++ie L+ +R+llGedL+s++++eLqq+eqqLe+s++++R+kK+e ++eqi++l++kek l en +L +k+ XP_028068621.1 98 TDNSSVEENMQHLKHEAADMANQIELLEVAKRKLLGEDLGSCTMEELQQIEQQLERSVSRVRAKKMEAFMEQIDQLKEKEKVLTAENAKLCEKI 191 455578899*********************************************************************************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 RVKRDNGVTS FVLCSISKLL STQETIQRYQ RHTKAVQTDN SSVEENMQHL KHEAADMANQ 120 IELLEVAKRK LLGEDLGSCT MEELQQIEQQ LERSVSRVRA KKMEAFMEQI DQLKEKEKVL 180 TAENAKLCEK ISSCAFISRG NNSQWNTSHF FPTWCIYPWI SCPASDCSLS PCILRPILVE 240 YIPVVSPLEN QKENAIHFAK RTGHVIVTAL NVVQTGHVYG DFMLFAKAAE SKQENPTLYM 300 IEMKKVESTF HLSSLEAMDF LDTFLSMNPD SSGHVKIHDF SRVLRLKACG LLKRSVTLLF 360 FYFYFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 5e-70 | MIKC_MADS family protein |