PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028068619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 369aa MW: 42314.8 Da PI: 8.2651 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.9 | 7.5e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_028068619.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 84 | 3.3e-28 | 95 | 188 | 5 | 98 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++s e+++++l++e+a + ++ie L+ +R+llGedL+s++++eLqq+eqqLe+s++++R+kK+e ++eqi++l++kek l en +L +k+ XP_028068619.1 95 TDNSSVEENMQHLKHEAADMANQIELLEVAKRKLLGEDLGSCTMEELQQIEQQLERSVSRVRAKKMEAFMEQIDQLKEKEKVLTAENAKLCEKI 188 455578899*********************************************************************************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 369 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 RDNGVTSFVL CSISKLLSTQ ETIQRYQRHT KAVQTDNSSV EENMQHLKHE AADMANQIEL 120 LEVAKRKLLG EDLGSCTMEE LQQIEQQLER SVSRVRAKKM EAFMEQIDQL KEKEKVLTAE 180 NAKLCEKISS CAFISRGNNS QWNTSHFFPT WCIYPWISCP ASDCSLSPCI LRPILFHNFM 240 EVEYIPVVSP LENQKENAIH FAKRTGHVIV TALNVVQTGH VYGDFMLFAK AAESKQENPT 300 LYMIEMKKVE STFHLSSLEA MDFLDTFLSM NPDSSGHVKI HDFSRVLRLK ACGLLKRSVT 360 LLFFYFYFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-70 | MIKC_MADS family protein |