PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068316.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 26145.8 Da PI: 9.7944 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.7 | 3.8e-20 | 54 | 103 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae+Aa a+++a+++++g XP_028068316.1 54 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEGAALAYDEAALRFKG 103 7********.**********94....45************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MVSALTQVIG NTNTTSQQTP LHHHPFHASS QSTVADQPNQ SQPSQDQGTQ KKRHYRGVRQ 60 RPWGKWAAEI RDPKKAARVW LGTFETAEGA ALAYDEAALR FKGNKAKLNF PERVQGRTEL 120 GYLTTRQDLR FVPPPLPPPR PFLSQEPYPD LLHYAQLLHS GGNVINNGVS GFYPRGVPFV 180 SQSLTTSTHS APPSTTSHHQ QGDVISFSSQ FGSSYSTSDD DPSRNWLDFD TNHSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61890.1 | 4e-34 | ERF family protein |