PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068057.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 383aa MW: 44162.8 Da PI: 7.1345 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 49.3 | 1.6e-15 | 48 | 134 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YAk++GF + ++++ + +g+++ C++ kr+++++ + +++ +++++Cka+++ ++ dg++++t+++l+H+H+l XP_028068057.1 48 EFYAKYAKNLGFAIAYRTQNV-RSDGKVKYFGIECTRAQKRTKRSEV--NPLKPSLSSKIDCKARIRAILQPDGRYKLTTVVLDHTHDLI 134 6*************9887665.48999**************999876..9999***********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence |
MDIDSNHPTL SGGEEVEEAE NNPSLNESDE IEEPKKGMWF TSKQEVHEFY AKYAKNLGFA 60 IAYRTQNVRS DGKVKYFGIE CTRAQKRTKR SEVNPLKPSL SSKIDCKARI RAILQPDGRY 120 KLTTVVLDHT HDLIPSDSRH FPMNKRIRTP VKRRLEINDE AGIGVSRNFH SIVVEAGGYE 180 ALTFDERDVR NHIENARRLR LGVGDAESVA FYFHRMQQEN SNFYSAIDFD VDGRIRNLFW 240 ADARSRAAYK AFGDVVSFDA TYLTNKYDMP FAPFVGVNHH GQSILFGCGL LSNENTDTFV 300 WLFKEWLNCM SATPPNAIIT DQCRAMQNAI QIVFPEARHR WCLWHVMKKI PEKLRGYSQY 360 EAIKFALQSA VYDSFRKDEF DEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 7e-74 | FAR1 family protein |