PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028068006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | CAMTA | ||||||||
Protein Properties | Length: 977aa MW: 108779 Da PI: 7.6177 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 178.3 | 9.7e-56 | 20 | 136 | 3 | 118 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei+++L n+ek++lt e++ rp+ gsl+L++rk++ryfrkDG+ w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n++fqr XP_028068006.1 20 QEaQHRWLRPAEICEVLRNHEKFHLTPEPPIRPPAGSLFLFDRKVLRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNENFQR 114 5559******************************************************************************************* PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+L+ ele+ivlvhy+evk XP_028068006.1 115 RSYWMLDGELENIVLVHYREVK 136 *******************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 977 aa Download sequence |
MAETRRYVPI QPLNLEQILQ EAQHRWLRPA EICEVLRNHE KFHLTPEPPI RPPAGSLFLF 60 DRKVLRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNE NFQRRSYWML 120 DGELENIVLV HYREVKEGSK LGGSRLLNAD PGSQFGSPEV SSAPCSEQTN SPIPTAFNGN 180 PEGDPTNASS SGTSPLAQPI HVSVNASAPA NEATGFQELS RVHLDAGFVG AGFNHGTSSF 240 ICADICGSRG NLSSTGEQKL DSEQLNAADF LTHKLTDARL DADNTVQDVS CGDRLIPDGQ 300 RTAQEHDFNQ PQYQNHSGSQ AIGTSTPKVD AQVAGANNVE AGELKKLDSF GRWMDKEMGG 360 DCDDSLMASD SGNYWNTLDT ENDDKEVSSL SRQMQLDIDS LGPSLSQEQL FSICDFAPDW 420 AYSGIETKVL ITGTFLGDKK HSGSLKWCCM FGEIEVAAEV LTDSVIRCQV PFHAPGRVPF 480 YITCSNRLAC SEVREFKYLE KLSEVASSAN AKSAPEDEMR FQIQLAKMLY AGSGKNRFDC 540 SMVECDKCKL EKDLNSFKID IQNDWKRIEH AVMMFEGYNV SPSDILIQNL LKNRLYEWLI 600 CKVHEVKGPH ILDNEGQGVI HLAATLGYVW AVGLIVAAGV SPNFRDARGR TALHWASYYG 660 REETVVALIR LGAAAGAVDD PTPAFPGGQT AADLASSRGH KGIAGYLAEA DLTSHLLSLT 720 LRDNSTNSVA AGMAAENAME SAAQNIFSPD RAIDEKHSLR RSLAAVRKSA HAAALLQAAF 780 RARSFRHRQL TKSSDDISEA SLDLVALGSL NKVQKVSHFD DYLHSAAIKI QQKYRGWKGR 840 KEFLKIRNRI MKIQAHVRGH QVRKQYKKFI WSVGIVEKAI LRWRRKGHGL RGFRRENTIE 900 NVVPETQKND EYEFLRIGRK QKVAGVVKAL ARVQSMVRHP EACDQYSRLV TKFENFKLSN 960 EVASESDKLK VQKEIDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09410.3 | 0.0 | CAMTA family protein |