PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028067687.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 279aa    MW: 30107.2 Da    PI: 10.7815
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028067687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-20118168256
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g+
  XP_028067687.1 118 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRGA 168
                     69*******.**********32....25**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MNPQMIHSVP FLPRPDLFRF NPPETFPIVN ELPRLYYGDP LSSSSIHQIP ANPQTHGSVA  60
AGTEPEIPPV LEGIAAIVGQ RILFGNGGSG VEKSGGVSGM EQSTGGGEKK SGVSVQKSYR  120
GVRKRPWGRW SAEIRDRIGR CRHWLGTFDT AEEAARAYDA AARRLRGAKA RTNFAIPPVL  180
PRPVPSPETT SSEGSSSEKT KKKRKKKIGV RSKTGAAQNS RKCAVVTSVA QLFSSSTSPN  240
ISMINEEQKK RKVEVELELK LGGNNNNSAS IMGLLSSCS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1201207KKKRKKK
2202206KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.17e-21ERF family protein