PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028067322.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 460aa MW: 52487.4 Da PI: 6.791 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.3 | 4e-21 | 92 | 185 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r + + +ek+r ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028067322.1 92 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPIYLDrvAEKSRAPKALTRVGCKAQFHIRYDAdageGGKYVVTHFVADHNHELA 185 9****************9999.666699999*********99877766899999****************987677789**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 460 aa Download sequence |
MTRAEVKREG DDYDIPNEAD DIRLMNESRV EPYHGCEVGL SNEEATNMNV EDGGADVKKE 60 MVDDAHGNDM VGDVERAILE QKFDSVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 120 LWLCSREGQR LPIYLDRVAE KSRAPKALTR VGCKAQFHIR YDADAGEGGK YVVTHFVADH 180 NHELAEQHCV MYLRSHRSLN SADKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFVHMD 240 LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDARFFYKTN AYKKPFVMLA GVTSHFRTTI 300 FACVLLANET IETYTWVLET FMKAMVNKAP VSVLTDKDKA MQEAIRRVFP DARHRLCNWH 360 LGKNTVSNVH ISGFAHAFKQ CMDMETGETK FEHGWTTMVE KFGLQTSSWV LETYEKHHMG 420 AEAYMRGHFF AGMKSTQRSE CMNAYFNPFL QHKLKLYEFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-63 | FAR1 family protein |