PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066897.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 366aa MW: 42524.2 Da PI: 6.3772

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066897.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.8	3.8e-23	28	118	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +vGFs+rk++ +k+k+++eit+rtfvC+keg+ +k++ +++r+e r+gC a++ +k+ + + k+ +++++HnH+l+p XP_028066897.1 28 DFYNTYGGNVGFSIRKAYANKNKHTKEITSRTFVCYKEGSWGIDKRD-PLVKNPRQEVRCGCGARFSIKLGRiSRKYIACDFVEHHNHDLVP 118 6****************************************9999.9999****************999************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MEENNIVDDC GWKPKVGMPF DSKQAAYDFY NTYGGNVGFS IRKAYANKNK HTKEITSRTF 60 VCYKEGSWGI DKRDPLVKNP RQEVRCGCGA RFSIKLGRIS RKYIACDFVE HHNHDLVPQD 120 CIHMLPSQRK ISTTQAIEVE LASESGIPLR SAYELFARES GGRVSLGFTK LDQKNCLRSK 180 RQKDLEYGEA VIFGTALMYD ETAESFTWLF QIFLEAMSNK APKTIFTDQD TAMAKAIPIV 240 MPDTNHRLCT WHLMQNAVKH VSSVFDDVGV KAVFLKFMHD IDDDEEFRIQ WDQMLDKYDA 300 FDNHWLEQTF RDYLNCDHNL MEFFMHFERV LYEKRYKELE AEYNLSQKIA EGFNSNFDVK 360 ASGRDL

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MEENNIVDDC GWKPKVGMPF DSKQAAYDFY NTYGGNVGFS IRKAYANKNK HTKEITSRTF  60
VCYKEGSWGI DKRDPLVKNP RQEVRCGCGA RFSIKLGRIS RKYIACDFVE HHNHDLVPQD  120
CIHMLPSQRK ISTTQAIEVE LASESGIPLR SAYELFARES GGRVSLGFTK LDQKNCLRSK  180
RQKDLEYGEA VIFGTALMYD ETAESFTWLF QIFLEAMSNK APKTIFTDQD TAMAKAIPIV  240
MPDTNHRLCT WHLMQNAVKH VSSVFDDVGV KAVFLKFMHD IDDDEEFRIQ WDQMLDKYDA  300
FDNHWLEQTF RDYLNCDHNL MEFFMHFERV LYEKRYKELE AEYNLSQKIA EGFNSNFDVK  360
ASGRDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-29	FAR1 family protein