PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066849.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 388aa MW: 42305.1 Da PI: 9.389

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	80	2.2e-25	130	173	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v+ g+k+CErH++rgr+rsrk++e XP_028066849.1 130 DPEPGRCRRTDGKKWRCSRDVVTGHKYCERHMNRGRNRSRKPVE 173 79***************************************987 PP
2	QLQ	36.4	1.7e-13	55	87	1	33
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlq 33 s+F+ Q+q+L+ Q+l++++++a+ vPp+Ll XP_028066849.1 55 SYFSLGQWQELELQALIFRHMLAGSCVPPQLLH 87 789****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MDFNLKQWKY QQHESDLQQH QQPSGSHPEL TSKLTHLSVF PPDSTTASRF PKMGSYFSLG 60 QWQELELQAL IFRHMLAGSC VPPQLLHLLN KTLLSPPPTP TPPSYYSLQH FPHYNPTLLQ 120 TGYWGRGGMD PEPGRCRRTD GKKWRCSRDV VTGHKYCERH MNRGRNRSRK PVEIPTPSSS 180 TSTAGGGSSG GGGGVIKTNT AFAAQPRTSM GTGGTTHFNL AGPSPSIDLL HLNQRPSESK 240 PENKLSLFET QNEVSGDGKS GGRVLRCFFD DWPRSLQQPS NAGTNASPVT SSTCLSISTP 300 NNPPPSDFSL KLSTGNGDDR PGHQEVSVER ERLQLNWAAS WGTNPVAPMG GPLAEALRSS 360 TASNSSPTSV LHQLQRGTMS ETTSYVST

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MDFNLKQWKY QQHESDLQQH QQPSGSHPEL TSKLTHLSVF PPDSTTASRF PKMGSYFSLG  60
QWQELELQAL IFRHMLAGSC VPPQLLHLLN KTLLSPPPTP TPPSYYSLQH FPHYNPTLLQ  120
TGYWGRGGMD PEPGRCRRTD GKKWRCSRDV VTGHKYCERH MNRGRNRSRK PVEIPTPSSS  180
TSTAGGGSSG GGGGVIKTNT AFAAQPRTSM GTGGTTHFNL AGPSPSIDLL HLNQRPSESK  240
PENKLSLFET QNEVSGDGKS GGRVLRCFFD DWPRSLQQPS NAGTNASPVT SSTCLSISTP  300
NNPPPSDFSL KLSTGNGDDR PGHQEVSVER ERLQLNWAAS WGTNPVAPMG GPLAEALRSS  360
TASNSSPTSV LHQLQRGTMS ETTSYVST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	3e-65	GRF family protein