PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028066522.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 172aa MW: 19109.3 Da PI: 6.8853 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.9 | 3.8e-05 | 27 | 49 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F+++ L H++ H XP_028066522.1 27 FECQYCDRGFPNSQALGGHQNAH 49 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MKLFGVPVTD CDEVPVTVPQ DGDNKRFECQ YCDRGFPNSQ ALGGHQNAHK KERQRAKRAQ 60 FESDHHQYPR FRMAVPVHNH HAARSGPLIH SSGSPSLSSN TNVACCCSSS FRSACECCVY 120 PPQVMAEFPP RSPPHWFHAG EPRQVALVGS DDDVVPSKSL MDDDKVDVDL HL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06650.1 | 4e-15 | C2H2 family protein |