PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028066339.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 31874.7 Da PI: 5.6359 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.5 | 1.7e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++ Ed +l +++++G +W+ +++ g+ R++k+c++rw +yl XP_028066339.1 14 KGEWSPVEDNKLRAYIHRYGHWNWRELPKYAGLSRCGKSCRLRWMNYL 61 799*****************99************************97 PP | |||||||
2 | Myb_DNA-binding | 55.4 | 1.4e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+ Ed+l+ +++++lG++ W++Ia++++ gRt++++k++w+++l XP_028066339.1 67 RGKYTKAEDDLIMELHEKLGNK-WSAIAAKLP-GRTDNEIKNHWHTHL 112 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 273 aa Download sequence |
MVRTPSFDKN GMKKGEWSPV EDNKLRAYIH RYGHWNWREL PKYAGLSRCG KSCRLRWMNY 60 LRPNVKRGKY TKAEDDLIME LHEKLGNKWS AIAAKLPGRT DNEIKNHWHT HLKKRIKENQ 120 STFELKQKAI QISQSLANLE LQSHESPRSE INQVTDELGS KDVTDEIYQQ ILESSPLSSR 180 ELSSSDFSSS MTSDYALLSD KNWVGEDIMS SLELFEESVR NFWIEPVFEE FSYQQNGFSS 240 TLAEGESMCP CFLDHDDDSI EWFHQILKEL PEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G31180.1 | 3e-57 | MYB family protein |