PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028065876.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 216aa MW: 24767.2 Da PI: 9.8549 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 39.1 | 2.4e-12 | 49 | 135 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +Y k++ F + ++++ ++ge++ C++ kr+++++ + +++ +++++Ck +++ +++kdg++++t ++l+H+H+l p XP_028065876.1 49 FYAKYEKHLRFAIAYRTQNIG-DDGEVKYFGIECTRARKRTKRSEV--NPLKPSLSSKIECKVRVRASLQKDGRYRLTIVVLKHTHDLIP 135 9************99988776.9999***************99877..9999***********************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MDIDSNNTSF NGIEEVEEPE NNLSLNESGE VEGSKKGMYF ISKQEVYAFY AKYEKHLRFA 60 IAYRTQNIGD DGEVKYFGIE CTRARKRTKR SEVNPLKPSL SSKIECKVRV RASLQKDGRY 120 RLTIVVLKHT HDLIPSNSRH FAMNKRILTP VKRRLEINDA VGIGVAKNFH SIVVKAGRYE 180 ALIFDERDAR NHIENARKLT RGVGDAESIA LYFHNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-11 | FAR1 family protein |