PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028065859.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | SRS | ||||||||
Protein Properties | Length: 188aa MW: 21178.7 Da PI: 8.7973 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 168 | 4.9e-52 | 10 | 144 | 4 | 154 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaesk 97 +++CqdCGnqakk+Ca++RCRtCCk+rgf+C+thvkstWvp+++r +r qq+ + +++++++ +++++kr +++++ XP_028065859.1 10 DSSRCQDCGNQAKKGCAYMRCRTCCKTRGFQCQTHVKSTWVPVSRRHSRLQQQFPTVHQQQHQHlQAQNPKRC-----------------RQNPP 87 5789*********************************************777766544443322133333333.................34577 PP DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + le+ ++P+e++ + frcvrvss d++ +++aYqt ++igGh+fkGiLydqG+e+ XP_028065859.1 88 TGLEVGNFPAELHIPTTFRCVRVSSHDNAVDQYAYQTEINIGGHLFKGILYDQGPEA 144 7899999************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MMMRQGGGSD SSRCQDCGNQ AKKGCAYMRC RTCCKTRGFQ CQTHVKSTWV PVSRRHSRLQ 60 QQFPTVHQQQ HQHLQAQNPK RCRQNPPTGL EVGNFPAELH IPTTFRCVRV SSHDNAVDQY 120 AYQTEINIGG HLFKGILYDQ GPEAETHYTA DESASVQQQP NLITTGLTSS SYPSPFIPGT 180 QYFPYPKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 9e-48 | SRS family protein |