PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028065702.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 254aa MW: 29431.4 Da PI: 10.1041 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.5 | 2.8e-31 | 27 | 76 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_028065702.1 27 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 76 79***********************************************8 PP | |||||||
2 | K-box | 110.9 | 1.4e-36 | 97 | 191 | 6 | 100 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + s++e +a+ +qqe+akL+ +i nLq+++Rh+ Ge+L sLs+++L++Le +Le+++++iRskKnell+++ie +qk+e +l+++n++Lr+k++e XP_028065702.1 97 TGSVSELNAQFYQQEAAKLRVQIGNLQNSNRHMRGESLCSLSMRDLKNLEGRLERGISRIRSKKNELLFAEIELMQKREIDLHNNNQYLRAKIAE 191 3448999*************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MEFQNQSMDV SRLSPQRKMG RGKIEIKRIE NTTNRQVTFC KRRNGLLKKA YELSVLCDAE 60 VALIVFSTRG RLYEYANNSV KATIERYKKA CSGPSNTGSV SELNAQFYQQ EAAKLRVQIG 120 NLQNSNRHMR GESLCSLSMR DLKNLEGRLE RGISRIRSKK NELLFAEIEL MQKREIDLHN 180 NNQYLRAKIA ENERAQQQMS LMPGGPEYEL MPSQSFDARN YLQMNGIQQQ QPQQQQPPNH 240 HHYSRHDQTA LQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-123 | MIKC_MADS family protein |