PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028065694.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 276aa MW: 31888.4 Da PI: 9.9028 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.3 | 3.2e-31 | 27 | 76 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_028065694.1 27 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 76 79***********************************************8 PP | |||||||
2 | K-box | 110.6 | 1.6e-36 | 97 | 191 | 6 | 100 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + s++e +a+ +qqe+akL+ +i nLq+++Rh+ Ge+L sLs+++L++Le +Le+++++iRskKnell+++ie +qk+e +l+++n++Lr+k++e XP_028065694.1 97 TGSVSELNAQFYQQEAAKLRVQIGNLQNSNRHMRGESLCSLSMRDLKNLEGRLERGISRIRSKKNELLFAEIELMQKREIDLHNNNQYLRAKIAE 191 3448999*************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MEFQNQSMDV SRLSPQRKMG RGKIEIKRIE NTTNRQVTFC KRRNGLLKKA YELSVLCDAE 60 VALIVFSTRG RLYEYANNSV KATIERYKKA CSGPSNTGSV SELNAQFYQQ EAAKLRVQIG 120 NLQNSNRHMR GESLCSLSMR DLKNLEGRLE RGISRIRSKK NELLFAEIEL MQKREIDLHN 180 NNQYLRAKIA ENERAQQQMS LMPGGPEYEL MPSQSFDARN YLQMNGIQQQ QPQQQQPPNH 240 HHYSRHDQTA LQLVANLVEI VLFCFNAFHT TLPLLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-122 | MIKC_MADS family protein |