PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028065519.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ARR-B | ||||||||
Protein Properties | Length: 572aa MW: 64628.8 Da PI: 6.4234 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 78.5 | 8.2e-25 | 199 | 252 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_028065519.1 199 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 40 | 9.4e-13 | 201 | 251 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_028065519.1 201 RVVWTVDLHQKFVKAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 251 678***********************************************7 PP | |||||||
3 | Response_reg | 79.4 | 1.3e-26 | 19 | 127 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+++l+k y ev+++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_028065519.1 19 VLVVDDDLVWLRILEKMLKKCSY-EVTTCCLAREALDLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMRGVQHG 111 89*********************.***************999999**********************6644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_028065519.1 112 ACDYLLKPIRMKELRN 127 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 572 aa Download sequence |
MESGFCAART DAFPAGLRVL VVDDDLVWLR ILEKMLKKCS YEVTTCCLAR EALDLLRERK 60 DGFDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMRGVQH GACDYLLKPI 120 RMKELRNIWQ HVFRKKIHEV RDIENLDCFE EIQMMRYGTD QSDDGHLFSG GDLTSGKKRK 180 DVENKGDDKD FSDASSAKKA RVVWTVDLHQ KFVKAVNQIG FDKVGPKKIL DLMNVPWLTR 240 ENVASHLQKY RLYLGRLQKE NEVKAFLGGI KQSDLSSKDP VGSLGLQNSI DLQQNDVPSG 300 IYGVPGNKIR VQNVDPKNHE GDLKGIVSLP LIEPKKAPIH DIPDPPKTCS SRVELNHLFR 360 PLEPDIKYIP FDSTIPTQYS WSEVPEIQFK QEHKAHLQLK NGFNHLPLPP SISPRPFNKE 420 REKPARVEVK PSYADCKRQQ IRQAGPTRSA ANLLPVQSES HMTSFHTSEP IATTTLSLKN 480 HGLNQIFLND LESAQKNLIL GSCSGFGSLD EDGLACLLRG DCHTTMNVGI ENRESVSLAE 540 TPAYLFDAQR FDHEYPWESM EYPVIDQGLF IV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-106 | ARR-B family protein |