PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065510.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 490aa MW: 56581.7 Da PI: 6.4707

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.5	8.7e-08	92	128	2	39
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39 fYn+YAk GFs+rks+ +++ ++g++++r + Cs+e XP_028065510.1 92 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREN 128 9**************9999.66669999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MAPAEVKREC DDYGIPNEAD DIRLINESRA EPYHGCEVGP SNEEATNVNV EDGEADVKKE 60 MIDDAHRNDM VGDVERAILE QKFDSVEYGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 120 LWLCSRENAG EGGKYVVTHF VTDHNHELAE QHCVMYLRSY ENVGFVRTDL HNHIQAERRA 180 EVEDDDAEGA LVYLCAKLDV DAHFFYKYDV CNDNKLQNLF WADSKSRADY TKFGDMLIFD 240 STYRTNAYKK PFVMLASVTS HFRTTIFACV LLANETSETY TWVLETFMEA MGNKASVSVL 300 TDGDKAVRKA IRRVFPDARH RLCNWHLGKN VVSNVHISGF AHAFKQCMDM ETDETKFEHG 360 WKTMVENFGL QTNSWVLKTY EKRHMWAEAY MRGHFFAGMK STQRLECMNA YFNPFLQHKL 420 KLHEFVRHYN RALARIRLVD PSTPHIKQRR LFFDASPDSK QPIGQYVSVE AAVCKNDSTT 480 IDEVNQVEWK

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MAPAEVKREC DDYGIPNEAD DIRLINESRA EPYHGCEVGP SNEEATNVNV EDGEADVKKE  60
MIDDAHRNDM VGDVERAILE QKFDSVEYGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  120
LWLCSRENAG EGGKYVVTHF VTDHNHELAE QHCVMYLRSY ENVGFVRTDL HNHIQAERRA  180
EVEDDDAEGA LVYLCAKLDV DAHFFYKYDV CNDNKLQNLF WADSKSRADY TKFGDMLIFD  240
STYRTNAYKK PFVMLASVTS HFRTTIFACV LLANETSETY TWVLETFMEA MGNKASVSVL  300
TDGDKAVRKA IRRVFPDARH RLCNWHLGKN VVSNVHISGF AHAFKQCMDM ETDETKFEHG  360
WKTMVENFGL QTNSWVLKTY EKRHMWAEAY MRGHFFAGMK STQRLECMNA YFNPFLQHKL  420
KLHEFVRHYN RALARIRLVD PSTPHIKQRR LFFDASPDSK QPIGQYVSVE AAVCKNDSTT  480
IDEVNQVEWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-59	FAR1 family protein