PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065466.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 128aa MW: 15336.1 Da PI: 11.3844

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.2	1.2e-10	10	58	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT....TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg....kgRtlkqcksrwqkyl 48 +g+WT+ Ed+ll ++++++G g W+ + ++ ++R++k+c++rw++yl XP_028065466.1 10 KGAWTQ-EDLLLRNCIQKYGEGVWHQ--HQVPlragLNRCRKSCRLRWLNYL 58 577875.79***********8877..66666666*************7 PP
2	Myb_DNA-binding	43.7	6.1e-14	64	109	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E +l+++++k+lG++ W++I +++ +Rt +++k++w+++l XP_028065466.1 64 RGNFTFDEVDLIIKLHKLLGNR-WSLIIGKLP-RRTSNDVKNFWNTHL 109 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 128 aa Download sequence
MKKVRLGMRK GAWTQEDLLL RNCIQKYGEG VWHQHQVPLR AGLNRCRKSC RLRWLNYLMP 60 NIKRGNFTFD EVDLIIKLHK LLGNRWSLII GKLPRRTSND VKNFWNTHLH KKMIAQREEE 120 RAKAHKNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-54	MYB family protein