PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065299.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 811aa MW: 93779 Da PI: 8.1235

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76	7.6e-24	58	144	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA ++GFs+rk k ++ + +++i +r+f C keg++ +e+ e+++ +r etrtgCka ++++ e dg w+vt ++ eHnHela XP_028065299.1 58 LYNNYALRMGFSIRKGKPRYYSGSKNIRQREFLCCKEGFKVDEDPF-EEKKLNRLETRTGCKAFVRLTVE-DGIWRVTAFNPEHNHELA 144 6****************999****************9999.99999*************9.**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 811 aa Download sequence
MLNDKVMNSE DFRIEEEINT SNDVERGERD CMFVARQENN DDNLLDKVVY SEDEAYALYN 60 NYALRMGFSI RKGKPRYYSG SKNIRQREFL CCKEGFKVDE DPFEEKKLNR LETRTGCKAF 120 VRLTVEDGIW RVTAFNPEHN HELALQSERH LLRSARHISK PKAGVINSMI NAGISTKNAY 180 SYLREEVGGS ENVGFTKRDC YNYVNKQKMT MISAGDAQSL LNHFKQKHTE DPMFFFTVQV 240 DQENRMTNFF WRDGRSRVDY DCFGDVVVFD TTYRTNKYNL ICAPFVGVNH HWQNVMFGCA 300 FLLDETTDSF IWLFKSFLES MGNRSPVTIF TDQDQAMSNA IQVVFPNTHH RLCLWHISKN 360 APSHLGELNT NTEFKYLFNK CQKYCDSTLE FQQTWDNVIQ KFSLESHRWL NMMYKIRHKW 420 STAFTKDSFT AEFKASSRSE STNNVLNNIA GKTTSLTNFV IEYDNLVAGM HSSKLDEDFR 480 CKQGAPQKAV KKSGILGHAA QVYTCKIFKL FENEFLNSLA MVWKQVDCQD TVDVFELKEE 540 NSERVRIVHF DHLTNNISCS CKKFESLGVL CCHALRVFSI KNLTAIPSQY ILKRWTKDAK 600 KGIMAYEQGN NSIANGKEAE IIWRNSMIRI VSTTIYKSQG NDSLKNICQK ILVELDEKIE 660 REFERLRLGT DMHIEEDQTV QCDTTNMSVL DPPQARSKGV RNTRLKGHFE KRKTKPSKDA 720 STSRKSKQVK QGPSHASLDV TYDTTTFQPP NGSPYVRPAD ANIHGQSYPP WTMHTQDMDF 780 AKIPFTTMLQ SVDVVNQFSQ KNDSYTEKLQ K

Sequence ? help Back to Top

Protein Sequence Length: 811 aa Download sequence

MLNDKVMNSE DFRIEEEINT SNDVERGERD CMFVARQENN DDNLLDKVVY SEDEAYALYN  60
NYALRMGFSI RKGKPRYYSG SKNIRQREFL CCKEGFKVDE DPFEEKKLNR LETRTGCKAF  120
VRLTVEDGIW RVTAFNPEHN HELALQSERH LLRSARHISK PKAGVINSMI NAGISTKNAY  180
SYLREEVGGS ENVGFTKRDC YNYVNKQKMT MISAGDAQSL LNHFKQKHTE DPMFFFTVQV  240
DQENRMTNFF WRDGRSRVDY DCFGDVVVFD TTYRTNKYNL ICAPFVGVNH HWQNVMFGCA  300
FLLDETTDSF IWLFKSFLES MGNRSPVTIF TDQDQAMSNA IQVVFPNTHH RLCLWHISKN  360
APSHLGELNT NTEFKYLFNK CQKYCDSTLE FQQTWDNVIQ KFSLESHRWL NMMYKIRHKW  420
STAFTKDSFT AEFKASSRSE STNNVLNNIA GKTTSLTNFV IEYDNLVAGM HSSKLDEDFR  480
CKQGAPQKAV KKSGILGHAA QVYTCKIFKL FENEFLNSLA MVWKQVDCQD TVDVFELKEE  540
NSERVRIVHF DHLTNNISCS CKKFESLGVL CCHALRVFSI KNLTAIPSQY ILKRWTKDAK  600
KGIMAYEQGN NSIANGKEAE IIWRNSMIRI VSTTIYKSQG NDSLKNICQK ILVELDEKIE  660
REFERLRLGT DMHIEEDQTV QCDTTNMSVL DPPQARSKGV RNTRLKGHFE KRKTKPSKDA  720
STSRKSKQVK QGPSHASLDV TYDTTTFQPP NGSPYVRPAD ANIHGQSYPP WTMHTQDMDF  780
AKIPFTTMLQ SVDVVNQFSQ KNDSYTEKLQ K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-124	FAR1 family protein