PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065196.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 514aa MW: 56455.3 Da PI: 7.4997

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.8	2.2e-09	336	383	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq XP_028065196.1 336 SHSLAERVRREKISERMKLLQDLVPGC----NKVNGKALMLDEIINYVQSLQ 383 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MDKEYFLNAV IPPTWKSMSS FPELNCLPEQ SSDCFLNCDK STEQYGSFES AMSSMVSSPV 60 ASNSAMSNDV FAIRELIGKL GNICNSTTQI SHNSCYTTPL NSPPKLHLPP KLANSMPMNH 120 NLPSLSADPG FAERAAKFSC FGSRSFNGRT NQLGLNNGEL PYRLSPLMAS VKLPRVSSSP 180 SIKAAVSPMG AQENKNSTQT QMEMRSSIGS DTKFRKVLES ATLDRTEFAS SNEGSSVSEQ 240 IPYGETVLKN PISSNSRKRK AGSRGKSNSV DATKVTEAED DPNTKRFKSN EGSGSANDTV 300 KTGDEDEKQT KANQKPPEPP KDYIHVRARR GQATDSHSLA ERVRREKISE RMKLLQDLVP 360 GCNKVNGKAL MLDEIINYVQ SLQRQVEFLS MKLASVNPRL EFNMDSLLSK DVFQPNGSFP 420 HQTYPLDSSA SAFFGQQTQE FPLVHTNLSS GNHTSTKLCQ NIGMQLPPVD EFGQGLPQFP 480 TLCEDDLQSI VQMGFGKNPN HNTGLESSHM KIEL

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MDKEYFLNAV IPPTWKSMSS FPELNCLPEQ SSDCFLNCDK STEQYGSFES AMSSMVSSPV  60
ASNSAMSNDV FAIRELIGKL GNICNSTTQI SHNSCYTTPL NSPPKLHLPP KLANSMPMNH  120
NLPSLSADPG FAERAAKFSC FGSRSFNGRT NQLGLNNGEL PYRLSPLMAS VKLPRVSSSP  180
SIKAAVSPMG AQENKNSTQT QMEMRSSIGS DTKFRKVLES ATLDRTEFAS SNEGSSVSEQ  240
IPYGETVLKN PISSNSRKRK AGSRGKSNSV DATKVTEAED DPNTKRFKSN EGSGSANDTV  300
KTGDEDEKQT KANQKPPEPP KDYIHVRARR GQATDSHSLA ERVRREKISE RMKLLQDLVP  360
GCNKVNGKAL MLDEIINYVQ SLQRQVEFLS MKLASVNPRL EFNMDSLLSK DVFQPNGSFP  420
HQTYPLDSSA SAFFGQQTQE FPLVHTNLSS GNHTSTKLCQ NIGMQLPPVD EFGQGLPQFP  480
TLCEDDLQSI VQMGFGKNPN HNTGLESSHM KIEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-98	bHLH family protein