PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028065160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 217aa MW: 25235.8 Da PI: 9.0524 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.1 | 1.3e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCda+v +iifs +gkl+eys+ XP_028065160.1 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDADVGLIIFSAKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 96 | 5.9e-32 | 79 | 174 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++++ + +++ e+ kLk+++e L+r+qRh++GedL++Ls+keLq+Le+qL+++lk+ Rs+Kn+l+ e+i+elqkk k+l eenk L kk++ XP_028065160.1 79 QLVAADIDSQGRWTLEHVKLKARLEVLERNQRHFMGEDLDTLSVKELQSLEHQLDSALKHLRSRKNQLMNESISELQKKDKALLEENKLLAKKIK 173 555555666789*********************************************************************************98 PP K-box 100 e 100 e XP_028065160.1 174 E 174 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MGRGKVELKR IENKINRQVT FSKRRSGLLK KAHEISVLCD ADVGLIIFSA KGKLFEYSTT 60 SCMERILERY ERYSYAERQL VAADIDSQGR WTLEHVKLKA RLEVLERNQR HFMGEDLDTL 120 SVKELQSLEH QLDSALKHLR SRKNQLMNES ISELQKKDKA LLEENKLLAK KIKEKEEKEL 180 ARHAQLEQQN HDQNSSSVDL SQPLHSLDIG NTWLELS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 1e-86 | MIKC_MADS family protein |