PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028064967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 184aa MW: 20071 Da PI: 5.0285 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.6 | 1.1e-16 | 18 | 68 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr++k +g+Wv+eIr+p g + r +lg++ t e Aa a++ a +l+g XP_028064967.1 18 KKYKGVRRRK-WGKWVSEIRVP---G-TqDRLWLGSYSTVEAAAVAHDVASYCLRG 68 59*****998.**********8...3.35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MSSSDEGSGG GATTAEQKKY KGVRRRKWGK WVSEIRVPGT QDRLWLGSYS TVEAAAVAHD 60 VASYCLRGPS SYNNLNFPAT LPVGVRIDMS PLSVQKAASD AGMAVDAQFV MNQTQQQHTR 120 SSTSSSSSSS SSSIDSCSRD ESKNVMNENN VNDECFGPWE GRMMSSHELE QREEALNISV 180 EDYV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 21 | 27 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71520.1 | 4e-44 | ERF family protein |