PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028064966.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 178aa MW: 19540.5 Da PI: 5.0049 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.7 | 4.5e-16 | 18 | 68 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr +k +g+Wv+eIr+p g + r +lg++ t e Aa a++ a +l+g XP_028064966.1 18 KKYKGVRCRK-WGKWVSEIRVP---G-TqDRLWLGSYSTVEAAAVAHDVASYCLRG 68 59*****777.**********8...3.35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MSSSDESSGG GATTAEQKKY KGVRCRKWGK WVSEIRVPGT QDRLWLGSYS TVEAAAVAHD 60 VASYCLRGPS SYNNLNFPAT LPVGVRTDMS PLSVQKAASD AGMAVDAQFV MNQTQQQHTR 120 SSTSSSSIDS WSRDESKNVM NENNVNDGCF GVWEGRMMSS HELEQREEAL NISVEDYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71520.1 | 2e-43 | ERF family protein |