PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028064640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 257aa MW: 29469.6 Da PI: 5.7677 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.6 | 1.6e-28 | 37 | 87 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr+g++KKAeELSvLCda+va+iifs tgkl+e+ss XP_028064640.1 37 KKIDNVTARQVTFSKRRKGLFKKAEELSVLCDADVALIIFSATGKLFEFSS 87 68***********************************************96 PP | |||||||
2 | K-box | 56.8 | 9.8e-20 | 121 | 201 | 20 | 100 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++++L ke+ + +++R++ Ge+L Ls++eLqqLe+ Le +l+++ kK e ++++i++lq+ke el een++Lr++++e XP_028064640.1 121 NFSRLSKEVAEKSHQLRQMRGEELPGLSIEELQQLERSLEAGLSHVIGKKGEKIMKEISNLQQKEMELMEENERLRQQVKE 201 67899999999999****************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MGVFLIAHYY LSIYIYIFEE RERLLYIEMA REKIQIKKID NVTARQVTFS KRRKGLFKKA 60 EELSVLCDAD VALIIFSATG KLFEFSSSSM TEILERRNLH SKNLDKLDQP SLELQLVENS 120 NFSRLSKEVA EKSHQLRQMR GEELPGLSIE ELQQLERSLE AGLSHVIGKK GEKIMKEISN 180 LQQKEMELME ENERLRQQVK EVSNARKHVA VATDSENMYI NEEGQSSESV NICNSTSPPQ 240 DYDSSVTSLK LGLPYSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 3e-92 | MIKC_MADS family protein |