PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064460.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 798aa MW: 91245.9 Da PI: 6.1888

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	43.8	5.1e-14	664	703	5	44
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 isledl++ F ++++dAA +Lgv+ +++Kr+CR+y++ W XP_028064460.1 664 ISLEDLQQRFGMKLEDAAESLGVSRSTVKRACREYNVTWW 703 89***********************************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MAEIDNMISD FPHDFKSYVK NHQLLCQRGK SKYGWVFWSG EDDPRELPPP PLRLSEIIDG 60 TLIAPPIPEF MEKIKSYFKD IVFCWHCTQF LIQFWKVIKI GGKRLLTTRH QPFGFNKIDE 120 GLCQYRLISL DYEFDMDRVS DEYLGLHGRV FRHQQWESTP NVQYYSCKEY PQRDRAIVCN 180 IKQSLAVPLF DPLRQHCIGV FEMVSTTDII NVYLGSFLYF EIQGLTRSKC EHLYHEKVKD 240 ETPEEIRKIL DVVYSTHYLP LAQTWSLCRL CNAVFRKYRT CHREGRMGDF LAACALQHLR 300 KGQGVVGRAI LTQNLVFCKD ITQFSITEYP FAHYAHKVGL TGSFAICLRS NYIEDNVYVL 360 EFFLPPNYTE GRDPRIALVP LLTTMKQHCK SFKVTSGEEL GEELSIEVLD ISEDGKLYSY 420 QIPQTARSPN KTEDGEETVF LDLSYQQLPE VDAIDTGNNI VSNTEENNIV FTSSQQKLVI 480 NSSQRLQRKV GIPISLEKDG KLDSFKKPQT ARSPNRMENG EEMVFLDLSD QQLLEVDAID 540 IGNNFVSNTE GNNSAVTSVQ QNCIINSSQR LQRKAGIPIS LEMDGKLDSF KKPQTARSPN 600 RMENGEEMVF LDLSDQQLLE VDAIDIGNNF VSNTEGNNSA VTSVQQNCII NSSQRLQRKA 660 GIPISLEDLQ QRFGMKLEDA AESLGVSRST VKRACREYNV TWWSPYKRSK DNQLFFNKLV 720 QGVVQEQILG SSQPPISDPP HMQDMVTASC TKPHFIAVQD ESIVTIKAKY GDDFIKFQLP 780 VLSGMVEFQQ QVAKRLKL

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MAEIDNMISD FPHDFKSYVK NHQLLCQRGK SKYGWVFWSG EDDPRELPPP PLRLSEIIDG  60
TLIAPPIPEF MEKIKSYFKD IVFCWHCTQF LIQFWKVIKI GGKRLLTTRH QPFGFNKIDE  120
GLCQYRLISL DYEFDMDRVS DEYLGLHGRV FRHQQWESTP NVQYYSCKEY PQRDRAIVCN  180
IKQSLAVPLF DPLRQHCIGV FEMVSTTDII NVYLGSFLYF EIQGLTRSKC EHLYHEKVKD  240
ETPEEIRKIL DVVYSTHYLP LAQTWSLCRL CNAVFRKYRT CHREGRMGDF LAACALQHLR  300
KGQGVVGRAI LTQNLVFCKD ITQFSITEYP FAHYAHKVGL TGSFAICLRS NYIEDNVYVL  360
EFFLPPNYTE GRDPRIALVP LLTTMKQHCK SFKVTSGEEL GEELSIEVLD ISEDGKLYSY  420
QIPQTARSPN KTEDGEETVF LDLSYQQLPE VDAIDTGNNI VSNTEENNIV FTSSQQKLVI  480
NSSQRLQRKV GIPISLEKDG KLDSFKKPQT ARSPNRMENG EEMVFLDLSD QQLLEVDAID  540
IGNNFVSNTE GNNSAVTSVQ QNCIINSSQR LQRKAGIPIS LEMDGKLDSF KKPQTARSPN  600
RMENGEEMVF LDLSDQQLLE VDAIDIGNNF VSNTEGNNSA VTSVQQNCII NSSQRLQRKA  660
GIPISLEDLQ QRFGMKLEDA AESLGVSRST VKRACREYNV TWWSPYKRSK DNQLFFNKLV  720
QGVVQEQILG SSQPPISDPP HMQDMVTASC TKPHFIAVQD ESIVTIKAKY GDDFIKFQLP  780
VLSGMVEFQQ QVAKRLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	6e-71	Nin-like family protein