PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064454.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 708aa MW: 80999.1 Da PI: 5.5589

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	51.3	2.3e-16	521	565	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 +is+ed+++ F ++++dAAk+L v+ ++LKr+CR+y+I+ W Rk XP_028064454.1 521 QISFEDIQQRFGMKLNDAAKSLCVSRSTLKRACREYNISCWSTRK 565 79******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MGDDHFKPFV QTESPKHGNT FSDFDDDDFE IYVKKNQLFC ERGKFSRGWV FWNQEDERCE 60 FLPEHYFQLC TVISENLIQK IKSFFRELRF LQEQVLVQFW KALEFGGGYL LTTKDQPFGL 120 NTTHEGLCSY RLISVDYQFD VDGESDECLG LPGRVFKYQR PEFTPNVRYY SCKEYPQRDR 180 AVNSDIWGSL ALPVFDDIGW GCVGVLELVT SAEMKHCISL FKHWICNDLE AVGLRSSRTC 240 NYSYCQHDED KALEIALVEI RVVLEVVCRT HFLPLAQTWI LCRPCSAVAY DDSFGVSCLE 300 QLTSIIDVVC LREKDKFPFS NACASHHIRK GQGVVGRAYS SNKLVFCKDI TQFSIIEYPL 360 AHYAHEYGLA SCFAICLRSS YTGDNVYVVE FFLPPSNTEG EDPMIIVVPL LTTMKQHFQS 420 FMVASGEELG EQLPIEVIDL SKDDKLDSLP QIARSPADRM EIKGQMEWQD LSDQQLIKMD 480 TIYTGNDVVS KIEKTNNVVA SSFKKCIPDS SQRQYRKAGI QISFEDIQQR FGMKLNDAAK 540 SLCVSRSTLK RACREYNISC WSTRKRNKEN ETLSNKFVQV AAPDQIRQSS QSSISDPSHR 600 KYLATAAPTE LHFMAAQATS IVTLKVKYGD DYIKFQFPVL SGMVEFQQEV AKRLSLKAGA 660 YIVKYQDDNN DWILIACDED LQDYICNSRS LGRNTIKMLL QPISNCSP

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MGDDHFKPFV QTESPKHGNT FSDFDDDDFE IYVKKNQLFC ERGKFSRGWV FWNQEDERCE  60
FLPEHYFQLC TVISENLIQK IKSFFRELRF LQEQVLVQFW KALEFGGGYL LTTKDQPFGL  120
NTTHEGLCSY RLISVDYQFD VDGESDECLG LPGRVFKYQR PEFTPNVRYY SCKEYPQRDR  180
AVNSDIWGSL ALPVFDDIGW GCVGVLELVT SAEMKHCISL FKHWICNDLE AVGLRSSRTC  240
NYSYCQHDED KALEIALVEI RVVLEVVCRT HFLPLAQTWI LCRPCSAVAY DDSFGVSCLE  300
QLTSIIDVVC LREKDKFPFS NACASHHIRK GQGVVGRAYS SNKLVFCKDI TQFSIIEYPL  360
AHYAHEYGLA SCFAICLRSS YTGDNVYVVE FFLPPSNTEG EDPMIIVVPL LTTMKQHFQS  420
FMVASGEELG EQLPIEVIDL SKDDKLDSLP QIARSPADRM EIKGQMEWQD LSDQQLIKMD  480
TIYTGNDVVS KIEKTNNVVA SSFKKCIPDS SQRQYRKAGI QISFEDIQQR FGMKLNDAAK  540
SLCVSRSTLK RACREYNISC WSTRKRNKEN ETLSNKFVQV AAPDQIRQSS QSSISDPSHR  600
KYLATAAPTE LHFMAAQATS IVTLKVKYGD DYIKFQFPVL SGMVEFQQEV AKRLSLKAGA  660
YIVKYQDDNN DWILIACDED LQDYICNSRS LGRNTIKMLL QPISNCSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-107	Nin-like family protein