PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028064146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 307aa MW: 33605.1 Da PI: 6.4146 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.9 | 0.0007 | 115 | 137 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_028064146.1 115 YECKTCNRTFPSFQALGGHRASH 137 99**********99999998887 PP | |||||||
2 | zf-C2H2 | 13.6 | 0.0002 | 197 | 219 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H XP_028064146.1 197 HECSICGSEFSSGQALGGHMRRH 219 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MESPEEFTAS NDHTLIIKGK RTKRPRPSSP FGPAAAVTSS FSSADGGYWS IQSPASSGEI 60 STATDEDEDM ANCLILLAQG GVVGSKQVEA TAADEVEEGT TTATTTAGKP GFYVYECKTC 120 NRTFPSFQAL GGHRASHKKP KTTVEEKRSP LPISPPPSNH DDEEEESQFI KISPPLPLPI 180 ATKASQSHNN QNKSKVHECS ICGSEFSSGQ ALGGHMRRHR AAPNTRTTMS IIDTSNTVIM 240 ESQEEEEESE KPRHRLTLDL NLPAPLEDDH HHQVHHRHRD TNKFQFTTTT NKPHHVFSAA 300 ALVDCHY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 27 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 2e-57 | C2H2 family protein |