PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028064109.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 613aa MW: 66861 Da PI: 6.6157

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028064109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.3	1e-30	352	410	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_028064109.1 352 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 410 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MAQGRSELSI DSDRIGLFLY HPTVINSFPD DNHHHHLRHH HHHHHRPKLK FEPMEMEPTT 60 TRSPIKTIQF PVNLNCTTTT TSDQDIPTPS DHNHRTVIDE MDFFAQNKKH DDDSKATATT 120 VAADRPPPKL DFNVNTGLHL LTANTSSDQS MVDDGISPNS DDKRARTELA VLQAEIERMN 180 AENQRLRDML NQVTTNYNTL QMHLMTLMQQ QQEREHQQDD RNNNNMLDGK VEVDDNKKRG 240 GLMVPRQFMD LGLAAETEET ELSSSEGRSK DRSGSPVNDN GEAAASKELC DDQGREESPD 300 NGSSQGWCGG GGGPSKVARL NNSSKNVDQA TEATMRKARV SVRARSEAPM ISDGCQWRKY 360 GQKMAKGNPC PRAYYRCTMA AGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMAMAS 420 TTSSAARMLL SGSMPSADGL INSNFLARTL LPCSSNMATI SASAPFPTVT LDLTQSPNPL 480 QHFQRPPNPF HVPFPNPQPP ANLLPQAFGQ ALYNQSKFSG LQMSQDAQLG HQAVPLPPLN 540 QQNSLADTVT ALTADPNFTA AIAAAISSLI GGGNNNGNVA ATTTTSNNNG GVSSSNNNSG 600 DNNKVNNSSF MGN

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MAQGRSELSI DSDRIGLFLY HPTVINSFPD DNHHHHLRHH HHHHHRPKLK FEPMEMEPTT  60
TRSPIKTIQF PVNLNCTTTT TSDQDIPTPS DHNHRTVIDE MDFFAQNKKH DDDSKATATT  120
VAADRPPPKL DFNVNTGLHL LTANTSSDQS MVDDGISPNS DDKRARTELA VLQAEIERMN  180
AENQRLRDML NQVTTNYNTL QMHLMTLMQQ QQEREHQQDD RNNNNMLDGK VEVDDNKKRG  240
GLMVPRQFMD LGLAAETEET ELSSSEGRSK DRSGSPVNDN GEAAASKELC DDQGREESPD  300
NGSSQGWCGG GGGPSKVARL NNSSKNVDQA TEATMRKARV SVRARSEAPM ISDGCQWRKY  360
GQKMAKGNPC PRAYYRCTMA AGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMAMAS  420
TTSSAARMLL SGSMPSADGL INSNFLARTL LPCSSNMATI SASAPFPTVT LDLTQSPNPL  480
QHFQRPPNPF HVPFPNPQPP ANLLPQAFGQ ALYNQSKFSG LQMSQDAQLG HQAVPLPPLN  540
QQNSLADTVT ALTADPNFTA AIAAAISSLI GGGNNNGNVA ATTTTSNNNG GVSSSNNNSG  600
DNNKVNNSSF MGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-109	WRKY family protein