PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028063652.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 963aa MW: 104581 Da PI: 4.7161

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028063652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.7	2.5e-17	19	70	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k +g Wv+eIr+ gk++r++lg+f t+e+Aa a++aa+ l+g+ XP_028063652.1 19 SIYRGVRKRK-WGNWVSEIRES---GKKTRIWLGSFQTPEMAATAYDAAAFHLRGH 70 57***999.******3...467***********************997 PP
2	AP2	52.2	1.5e-16	456	507	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+GVr +k g+Wv+eIr+p g+r r++lg+f t+e+Aa a++aa+ ++g+ XP_028063652.1 456 STYRGVRKRK-GGKWVSEIREP---GHRSRIWLGSFETPEMAATAYDAAAFHFRGH 507 56***999.9*****8...556*********************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 963 aa Download sequence
MKESSNSHCS GSGGGGANSI YRGVRKRKWG NWVSEIRESG KKTRIWLGSF QTPEMAATAY 60 DAAAFHLRGH GARLNFPELA NRFPHPASSS VVDIRLAAQQ AAALGLRQLL WASTPVPSSP 120 APLDHKRKHE DLEPETLMAD SNVNENKPDS IKRAEEEAVE GGGSEESEAQ RPCLVENLNG 180 SVAENEVQEE KVDELMEEDA EKPSAENNNT ESADTQQPTE GASETVNNEQ ASFTDDHQKQ 240 DIQPNSIAYP QLESAQEQPS GGELQEPPSA EVPQQGFFSS VEEQPVSETQ TMSRKMEVPN 300 NKVGVLIGKA GDTIRFLQIN SGAEIQITRD GEADPYSSTR PVELIGTLEN INKAEKLIKD 360 VIEEADAGGC PALVARGFST VQAAGAADQI LIQVPNEKNP HYGRLRVHFF PTNYQSGGSN 420 PQSEPHITDL QAPLIYGMKE SSNSHSSGSG GGGAGSTYRG VRKRKGGKWV SEIREPGHRS 480 RIWLGSFETP EMAATAYDAA AFHFRGHGAR LNFPELANRL PHPASLSVEH IRLAAQQAAA 540 LGLRKLLCAS TQIPSSPAPL DHKRKHEDLE PETLMADSNA NENKLDSIKR AEEEVEEKEE 600 EAVEGGGSDE SEAKRPRLEE KLNSSVAENG VQEEKGDELA EEGAEKPSEE NNNTEPVDTQ 660 QSTEGASETV NNEQVPSTDD HEKEDIQPPS IANPQLESAR EQPCRRELQE PPSAEVPQQG 720 DFSSVEEQPV SESQTMSRKM EVPNNKVGVL IGQAGDTIWF LQINSGAKVQ ITRDGEADPY 780 SSTRPVELIG TLENINKAEK LIKDVIEEAD AGGSPAHVAR GFSTVQAAGA ADQILIQVPN 840 EKVRVIIGKG GETIRSLQTR SGARIQKGHW KYHCPKKRCL SATSFQQSQN QFWASPAAYT 900 TSASAPDPNL ASLTAQICQL QHILSTSQPS PFASIVSFIQ VCLVLLQVFL RLFGFLTLVL 960 LII

Sequence ? help Back to Top

Protein Sequence Length: 963 aa Download sequence

MKESSNSHCS GSGGGGANSI YRGVRKRKWG NWVSEIRESG KKTRIWLGSF QTPEMAATAY  60
DAAAFHLRGH GARLNFPELA NRFPHPASSS VVDIRLAAQQ AAALGLRQLL WASTPVPSSP  120
APLDHKRKHE DLEPETLMAD SNVNENKPDS IKRAEEEAVE GGGSEESEAQ RPCLVENLNG  180
SVAENEVQEE KVDELMEEDA EKPSAENNNT ESADTQQPTE GASETVNNEQ ASFTDDHQKQ  240
DIQPNSIAYP QLESAQEQPS GGELQEPPSA EVPQQGFFSS VEEQPVSETQ TMSRKMEVPN  300
NKVGVLIGKA GDTIRFLQIN SGAEIQITRD GEADPYSSTR PVELIGTLEN INKAEKLIKD  360
VIEEADAGGC PALVARGFST VQAAGAADQI LIQVPNEKNP HYGRLRVHFF PTNYQSGGSN  420
PQSEPHITDL QAPLIYGMKE SSNSHSSGSG GGGAGSTYRG VRKRKGGKWV SEIREPGHRS  480
RIWLGSFETP EMAATAYDAA AFHFRGHGAR LNFPELANRL PHPASLSVEH IRLAAQQAAA  540
LGLRKLLCAS TQIPSSPAPL DHKRKHEDLE PETLMADSNA NENKLDSIKR AEEEVEEKEE  600
EAVEGGGSDE SEAKRPRLEE KLNSSVAENG VQEEKGDELA EEGAEKPSEE NNNTEPVDTQ  660
QSTEGASETV NNEQVPSTDD HEKEDIQPPS IANPQLESAR EQPCRRELQE PPSAEVPQQG  720
DFSSVEEQPV SESQTMSRKM EVPNNKVGVL IGQAGDTIWF LQINSGAKVQ ITRDGEADPY  780
SSTRPVELIG TLENINKAEK LIKDVIEEAD AGGSPAHVAR GFSTVQAAGA ADQILIQVPN  840
EKVRVIIGKG GETIRSLQTR SGARIQKGHW KYHCPKKRCL SATSFQQSQN QFWASPAAYT  900
TSASAPDPNL ASLTAQICQL QHILSTSQPS PFASIVSFIQ VCLVLLQVFL RLFGFLTLVL  960
LII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71450.1	3e-34	ERF family protein