PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028063462.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WOX
Protein Properties Length: 277aa    MW: 31390.7 Da    PI: 6.1021
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028063462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.19.9e-2195155257
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     r+R+t+t+ ql++Le+lF + n +ps+++++++++ l    +++e++V+ WFqNrRa+ k+
  XP_028063462.1  95 RQRWTPTPVQLQILERLFDQgNGTPSKQKIKDITSDLsqhgQISESNVYHWFQNRRARSKR 155
                     89*****************99**************************************97 PP
2Wus_type_Homeobox101.18.2e-3395157365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        r+RWtPtp Q++iLe+l+++G  tP+k++i++it+ L+++G+i++ NV++WFQNr+aR+++kq
     XP_028063462.1  95 RQRWTPTPVQLQILERLFDQGNGTPSKQKIKDITSDLSQHGQISESNVYHWFQNRRARSKRKQ 157
                        79***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDWEKQQNQQ QRQDEVMNSS SNTTNNNNNG VFVKVMTDEQ LEILRKQIAA YAAICDQLVQ  60
MHKSLSSHSD LTGARLGNLY CDPLMTYVGH KISGRQRWTP TPVQLQILER LFDQGNGTPS  120
KQKIKDITSD LSQHGQISES NVYHWFQNRR ARSKRKQHVA APNNAESEVE TEVESPDGKK  180
TKSEDFESQH NPAPRAEDLC FQNPEISSGM RSLDSKSNKG EPMFPSNGSS KPERSLGQIS  240
FYDSMLSNPR IDHLIGKMEA SGSYNPYLQE DDYDMTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149157RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.13e-86WOX family protein