PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028063219.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 275aa    MW: 31289.8 Da    PI: 6.8432
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028063219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000166183123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_028063219.1 61 YSCSFCKREFRSAQALGGHMNVH 83
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MSFSALRSME QYSQYLMWMN KSKRILNVHF QDQFNSSWEE QAFMDDAVGP LGGFAWPPRS  60
YSCSFCKREF RSAQALGGHM NVHRRDRARL KQQSLTPQNE VLHHPQNCKS LDIASYPSQV  120
CFTDSNNTNP SSVSPSRVSV SAMSNQENFS EHTYMSPFCS ATVSEDRLGR RFNDSDSKTA  180
FGKNARKEDF TILNDSDSKP VYGKDEKRED FVFLGHDDCV ETSLSMGLNL NVFENQPSGF  240
GGDHHEVMTC KRHKTRGSLE DLDLELRLGD PPKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.12e-26C2H2 family protein