PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062706.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 527aa MW: 58829.6 Da PI: 5.9026

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.4	2.8e-06	274	295	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H XP_028062706.1 274 FCMICGKGFKRDANLRMHMRGH 295 59******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MDLKEKLSVD TWTKSSSSCH ELPKKVPPDH QSFTNFNLQQ YQQKWEDPSN QDYDMTIESQ 60 FPEFNQTSEA PSSVTCNPNN QTEIPDQQDV QMNEMCDSSR IQDWDPRAML NNLSFLEQKI 120 HQLQDLVHLV VSRRGQVVTR SDELVSQQQQ LITADLTSII VQLISTAGSL LPSVKQTLYT 180 NPSITQFGQL GGVVFPSGPN LNGSAVQQNI GGRKVSDQSN HVDLTGSCKI EQNCIEDHES 240 KDEEDADEGE NLPPGSYEIL QLEKEEILAP HTHFCMICGK GFKRDANLRM HMRGHGDEYK 300 TPAALAKPHK ESSSEPMLIK RYSCPYAGCK RNKDHKKFQP LKTILCVKNH YKRTHCDKSY 360 TCSRCNTKKF SVIADLKTHE KHCGRDKWLC SCGTTFSRKD KLFGHIALFQ GHTPAISLDE 420 TKASASGPSD LGEDNEATNK VEFTGLNFGS NVLNGFGGQN VLDIKGSVDD PASFFSPLSF 480 DPCNLSGLHE FPRPPFEDSE SSFSFLMSGL CNYPRKTGGD SGSNDLE

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MDLKEKLSVD TWTKSSSSCH ELPKKVPPDH QSFTNFNLQQ YQQKWEDPSN QDYDMTIESQ  60
FPEFNQTSEA PSSVTCNPNN QTEIPDQQDV QMNEMCDSSR IQDWDPRAML NNLSFLEQKI  120
HQLQDLVHLV VSRRGQVVTR SDELVSQQQQ LITADLTSII VQLISTAGSL LPSVKQTLYT  180
NPSITQFGQL GGVVFPSGPN LNGSAVQQNI GGRKVSDQSN HVDLTGSCKI EQNCIEDHES  240
KDEEDADEGE NLPPGSYEIL QLEKEEILAP HTHFCMICGK GFKRDANLRM HMRGHGDEYK  300
TPAALAKPHK ESSSEPMLIK RYSCPYAGCK RNKDHKKFQP LKTILCVKNH YKRTHCDKSY  360
TCSRCNTKKF SVIADLKTHE KHCGRDKWLC SCGTTFSRKD KLFGHIALFQ GHTPAISLDE  420
TKASASGPSD LGEDNEATNK VEFTGLNFGS NVLNGFGGQN VLDIKGSVDD PASFFSPLSF  480
DPCNLSGLHE FPRPPFEDSE SSFSFLMSGL CNYPRKTGGD SGSNDLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein