PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028062416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 26209.4 Da PI: 10.6105 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.1 | 6.8e-11 | 109 | 150 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ g+ e Aa+++++a+ XP_028062416.1 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEAAARLYDRAAF 150 79**98..47*********4.....5********************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 232 aa Download sequence |
MVSIRRRKLL GLCSGRSSFF SPLPRFSDNG NASGNPTQNA KPVSVHPMPS VDGEQPKEKT 60 ISKVSPGSSN ASGSSSSKEQ HNQQYPVPEV KRRKRHRRKH FENQEPCLMR GVYFKNMKWQ 120 AAIKVDKKQI HLGTVGSQEA AARLYDRAAF MCGREPNFEL SEEEKQELRK FKWDEFLAMT 180 RSAITNKRHR RRTGAGARRK SEPSTQNSDW EGEQGVNGFS ASEDVEPETS LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G13040.1 | 1e-45 | ERF family protein |