PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062271.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 392aa MW: 43921 Da PI: 9.3661

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	95.9	7.9e-30	52	173	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..........eaesssssasnss 86 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl + k++i+el+ ++ ++ c ++ ++ ++a XP_028062271.1 52 FGGKDRHSKVSTIRGLRDRRIRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLDATKHEIDELPPLQIPPG--CftqfhqptlvSH-QELNNA---- 139 689*************************************************************77777..3323322222111.111111.... PP TCP 87 sg................................k 89 + + XP_028062271.1 140 -PqssfssffssiptymkdggtqsllpnkegikiN 173 .1223445666666777666666665544444441 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MMREDDHKLR GKDFQAKVEG DTSNSKVTKA PSSSRQWSAF KNPRIVRVSR AFGGKDRHSK 60 VSTIRGLRDR RIRLSVPTAI QLYDLQDRLG LNQPSKVVDW LLDATKHEID ELPPLQIPPG 120 CFTQFHQPTL VSHQELNNAP QSSFSSFFSS IPTYMKDGGT QSLLPNKEGI KINYNVEDNQ 180 SKTWDLDDTA MRAKLKEVER EANIVEKAKW MRTNEHQNHQ DGSSSAGYNA QVSAQNFFPI 240 ASNSSFPSLL NNAMPMPYNY YQWEPSNLSL SQFGSHGLLS QTEGANTGHL TPLPSSLALP 300 SRSQLFLYPP ASTPSIFPSY PPYITLGEND TRQLPTNHFQ LWSSNSQQAL PNPLMSSLHS 360 FTSPMSSTSK VLHLQSQNDD QRQPNKGGNT GF

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MMREDDHKLR GKDFQAKVEG DTSNSKVTKA PSSSRQWSAF KNPRIVRVSR AFGGKDRHSK  60
VSTIRGLRDR RIRLSVPTAI QLYDLQDRLG LNQPSKVVDW LLDATKHEID ELPPLQIPPG  120
CFTQFHQPTL VSHQELNNAP QSSFSSFFSS IPTYMKDGGT QSLLPNKEGI KINYNVEDNQ  180
SKTWDLDDTA MRAKLKEVER EANIVEKAKW MRTNEHQNHQ DGSSSAGYNA QVSAQNFFPI  240
ASNSSFPSLL NNAMPMPYNY YQWEPSNLSL SQFGSHGLLS QTEGANTGHL TPLPSSLALP  300
SRSQLFLYPP ASTPSIFPSY PPYITLGEND TRQLPTNHFQ LWSSNSQQAL PNPLMSSLHS  360
FTSPMSSTSK VLHLQSQNDD QRQPNKGGNT GF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-49	TCP family protein