PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028062266.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 356aa MW: 41022.7 Da PI: 4.8719

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028062266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.9	2.7e-19	146	191	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W++eEd llv++vk++G + W+ Ia++++ gR +kqc++rw+++l XP_028062266.1 146 QQWSPEEDRLLVQLVKEYGEKKWSHIAQMLN-GRMGKQCRERWHNHL 191 68***************************.***********97 PP
2	Myb_DNA-binding	55	1.9e-17	199	239	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W++eE+ +l ++++qlG++ W++Iar+m+ gRt++ +k++w+ XP_028062266.1 199 IWSEEEEMKLTEVHRQLGNK-WAAIAREMP-GRTENTIKNHWN 239 6*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MENGLLIGSS SPDGLYQNFP NFDKFPIQGS SSSNLSLGVL APFYDQFDPF QPSSINGCLN 60 NRFHLNASIP SGSNGANHVM HDGQNVGFLN YPPRILPEAL NQDQTFQPKN YQTFGSTNVN 120 LSDEVSCLTK EGGNRKKFES KRRRMQQWSP EEDRLLVQLV KEYGEKKWSH IAQMLNGRMG 180 KQCRERWHNH LRPDIKKDIW SEEEEMKLTE VHRQLGNKWA AIAREMPGRT ENTIKNHWNA 240 TKRWRFSKRK DSTVTDGQES PSSDSNLRIV DNTGLEEDNK DQKDPTSDSD KAVDYQIYEK 300 MAVEEDDFGS MLNESNKAEL EMEMEMMPAE LMDKEMSFDV NNKDMDLLEM LCQEIF

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MENGLLIGSS SPDGLYQNFP NFDKFPIQGS SSSNLSLGVL APFYDQFDPF QPSSINGCLN  60
NRFHLNASIP SGSNGANHVM HDGQNVGFLN YPPRILPEAL NQDQTFQPKN YQTFGSTNVN  120
LSDEVSCLTK EGGNRKKFES KRRRMQQWSP EEDRLLVQLV KEYGEKKWSH IAQMLNGRMG  180
KQCRERWHNH LRPDIKKDIW SEEEEMKLTE VHRQLGNKWA AIAREMPGRT ENTIKNHWNA  240
TKRWRFSKRK DSTVTDGQES PSSDSNLRIV DNTGLEEDNK DQKDPTSDSD KAVDYQIYEK  300
MAVEEDDFGS MLNESNKAEL EMEMEMMPAE LMDKEMSFDV NNKDMDLLEM LCQEIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	4e-53	MYB family protein